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EBISPOT

EMBL-EBI Samples, Phenotypes, and Ontologies Team

59 followers
https://www.ebi.ac.uk/spot/

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efo efo Public

Github repo for the Experimental Factor Ontology (EFO)

Python 63 15
DUO DUO Public

Ontology for consent codes and data use requirements

Makefile 68 17
CMPO CMPO Public

Cellular Microscopy Phenotype Ontology

Python 6 2
ols4 ols4 Public

The EMBL-EBI Ontology Lookup Service (OLS)

Java 87 40

Repositories

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Showing 10 of 106 repositories

environmental-exposure-ontology Public Forked from EnvironmentOntology/environmental-exposure-ontology
Modular environmental exposures ontology

EBISPOT/environmental-exposure-ontology’s past year of commit activity

Makefile 0 21 0 0 Updated May 5, 2026
oxo2 Public
A SSSOM compliant implementation of OxO that is backwards compatible with OxO version 1

EBISPOT/oxo2’s past year of commit activity

Java 1 Apache-2.0 0 0 0 Updated May 5, 2026
ols4 Public
The EMBL-EBI Ontology Lookup Service (OLS)

EBISPOT/ols4’s past year of commit activity

Java 87 Apache-2.0 40 86 (1 issue needs help) 16 Updated May 5, 2026
efo Public
Github repo for the Experimental Factor Ontology (EFO)

EBISPOT/efo’s past year of commit activity

Python 63 15 202 (2 issues need help) 13 Updated May 1, 2026
gwas-utils Public
Collection of tools and scripts to manage GWAS Catalog related infrastructure.

EBISPOT/gwas-utils’s past year of commit activity

Python 6 3 10 2 Updated May 1, 2026
zooma2 Public

EBISPOT/zooma2’s past year of commit activity

Java 0 Apache-2.0 0 0 0 Updated May 1, 2026
goci Public
GWAS Catalog Ontology and Curation Infrastructure

EBISPOT/goci’s past year of commit activity

Java 26 Apache-2.0 19 319 9 Updated Apr 30, 2026
GrEBI Public
HPC aggregation pipeline and API/MCP server for LLM-mediated biomedical data integration

EBISPOT/GrEBI’s past year of commit activity

Jupyter Notebook 4 Apache-2.0 3 16 0 Updated Apr 29, 2026
gwas-ui Public

EBISPOT/gwas-ui’s past year of commit activity

JavaScript 5 Apache-2.0 3 18 5 Updated Apr 27, 2026
gwas-beyond-snps Public
Supporting new types of genetic variation in the GWAS Catalog

EBISPOT/gwas-beyond-snps’s past year of commit activity

Python 0 Apache-2.0 0 0 0 Updated Apr 24, 2026

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